From c2a5cc06d16b0fb6f1ea30e01f2dbf365c3a9179 Mon Sep 17 00:00:00 2001
From: albertmena <12760268+albertmena@users.noreply.github.com>
Date: Tue, 13 Oct 2026 10:43:50 +0200
Subject: [PATCH 1/6] xmipp3 envitonment yaml files

---
 conda/xmipp_CPU.yml    | 21 +++++++++++++++++++++
 conda/xmipp_CUDA11.yml | 21 +++++++++++++++++++++
 conda/xmipp_CUDA12.yml | 22 ++++++++++++++++++++++
 conda/xmipp_CUDA13.yml | 21 +++++++++++++++++++++
 4 files changed, 85 insertions(+)
 create mode 100644 conda/xmipp_CPU.yml
 create mode 100644 conda/xmipp_CUDA11.yml
 create mode 100644 conda/xmipp_CUDA12.yml
 create mode 100644 conda/xmipp_CUDA13.yml

diff --git a/conda/xmipp_CPU.yml b/conda/xmipp_CPU.yml
new file mode 100644
index 000000000..d4e306d28
--- /dev/null
+++ b/conda/xmipp_CPU.yml
@@ -0,0 +1,21 @@
+name: xmipp3
+channels:
+  - nvidia
+  - conda-forge
+  - nodefaults
+dependencies:
+  - gcc_linux-64
+  - gxx_linux-64
+  - cmake=3.31.8
+  - zlib
+  - fftw
+  - hdf5>=1.8,<=1.12.2
+  - openmpi
+  - sqlite>=3
+  - libtiff
+  - libjpeg-turbo
+  - openjdk=11.0.29
+  - libcxxabi
+  - pip:
+      - numpy==1.26.4
+
diff --git a/conda/xmipp_CUDA11.yml b/conda/xmipp_CUDA11.yml
new file mode 100644
index 000000000..89ffe80dd
--- /dev/null
+++ b/conda/xmipp_CUDA11.yml
@@ -0,0 +1,21 @@
+name: xmipp3
+channels:
+  - nvidia
+  - conda-forge
+  - nodefaults
+dependencies:
+  - cuda=11.8.0
+  - gcc_linux-64
+  - gxx_linux-64
+  - cmake=3.31.8
+  - zlib
+  - fftw
+  - hdf5>=1.8,<=1.12.2
+  - openmpi
+  - sqlite>=3
+  - libtiff
+  - libjpeg-turbo
+  - openjdk=11.0.29
+  - libcxxabi
+  - pip:
+      - numpy==1.26.4
diff --git a/conda/xmipp_CUDA12.yml b/conda/xmipp_CUDA12.yml
new file mode 100644
index 000000000..8ad9035f3
--- /dev/null
+++ b/conda/xmipp_CUDA12.yml
@@ -0,0 +1,22 @@
+name: xmipp3
+channels:
+  - nvidia
+  - conda-forge
+  - nodefaults
+dependencies:
+  - cuda=12.8.1
+  - gcc_linux-64
+  - gxx_linux-64
+  - cmake=3.31.8
+  - zlib
+  - fftw
+  - hdf5>=1.8,<=1.12.2
+  - openmpi
+  - sqlite>=3
+  - libtiff
+  - libjpeg-turbo
+  - openjdk=11.0.29
+  - libcxxabi
+  - pip:
+      - numpy==1.26.4
+
diff --git a/conda/xmipp_CUDA13.yml b/conda/xmipp_CUDA13.yml
new file mode 100644
index 000000000..d2bf4b15f
--- /dev/null
+++ b/conda/xmipp_CUDA13.yml
@@ -0,0 +1,21 @@
+name: xmipp3
+channels:
+  - nvidia
+  - conda-forge
+  - nodefaults
+dependencies:
+  - cuda=13.1.1
+  - gcc_linux-64
+  - gxx_linux-64
+  - cmake=3.31.8
+  - zlib
+  - fftw
+  - hdf5>=1.8,<=1.12.2
+  - openmpi
+  - sqlite>=3
+  - libtiff
+  - libjpeg-turbo
+  - openjdk=11.0.29
+  - libcxxabi
+  - pip:
+      - numpy==1.26.4

From a0a6e2c8fa8552aaa7914a89bfea4aa0a306cafa Mon Sep 17 00:00:00 2001
From: albertmena <12760268+albertmena@users.noreply.github.com>
Date: Tue, 13 Oct 2026 11:16:10 +0200
Subject: [PATCH 2/6] xmipp3 envitonment yaml files

---
 conda/environments.json | 8 ++++++++
 1 file changed, 8 insertions(+)
 create mode 100644 conda/environments.json

diff --git a/conda/environments.json b/conda/environments.json
new file mode 100644
index 000000000..360cb4fc3
--- /dev/null
+++ b/conda/environments.json
@@ -0,0 +1,8 @@
+{
+  "environments": [
+    {"id": "CUDA13", "file": "conda/xmipp_CUDA13.yml", "min_driver_version": "580.65.06"},
+    {"id": "CUDA12", "file": "conda/xmipp_CUDA12.yml", "min_driver_version": "525.60.13"},
+    {"id": "CUDA11", "file": "conda/xmipp_CUDA11.yml", "min_driver_version": "450.80.02"},
+    {"id": "CPU",    "file": "conda/xmipp_CPU.yml"}
+  ]
+}
\ No newline at end of file

From 232561f211b619ba3cca993ca149a9d650830aa5 Mon Sep 17 00:00:00 2001
From: Martin Salinas <ssalinasmartin@gmail.com>
Date: Tue, 13 Oct 2026 11:34:40 +0200
Subject: [PATCH 3/6] Trailing line break

---
 conda/environments.json | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conda/environments.json b/conda/environments.json
index 360cb4fc3..196ad0aa0 100644
--- a/conda/environments.json
+++ b/conda/environments.json
@@ -5,4 +5,4 @@
     {"id": "CUDA11", "file": "conda/xmipp_CUDA11.yml", "min_driver_version": "450.80.02"},
     {"id": "CPU",    "file": "conda/xmipp_CPU.yml"}
   ]
-}
\ No newline at end of file
+}

From ae57048a01eff7bbd3ed0bc55e41290cbe8df5b5 Mon Sep 17 00:00:00 2001
From: albertmena <12760268+albertmena@users.noreply.github.com>
Date: Tue, 13 Oct 2026 11:40:45 +0200
Subject: [PATCH 4/6] xmipp3 envitonment yaml files

---
 conda/xmipp_CPU.yml    | 1 -
 conda/xmipp_CUDA11.yml | 1 -
 conda/xmipp_CUDA12.yml | 1 -
 conda/xmipp_CUDA13.yml | 1 -
 4 files changed, 4 deletions(-)

diff --git a/conda/xmipp_CPU.yml b/conda/xmipp_CPU.yml
index d4e306d28..2d1e22e94 100644
--- a/conda/xmipp_CPU.yml
+++ b/conda/xmipp_CPU.yml
@@ -1,4 +1,3 @@
-name: xmipp3
 channels:
   - nvidia
   - conda-forge
diff --git a/conda/xmipp_CUDA11.yml b/conda/xmipp_CUDA11.yml
index 89ffe80dd..0bed849e7 100644
--- a/conda/xmipp_CUDA11.yml
+++ b/conda/xmipp_CUDA11.yml
@@ -1,4 +1,3 @@
-name: xmipp3
 channels:
   - nvidia
   - conda-forge
diff --git a/conda/xmipp_CUDA12.yml b/conda/xmipp_CUDA12.yml
index 8ad9035f3..007937bb2 100644
--- a/conda/xmipp_CUDA12.yml
+++ b/conda/xmipp_CUDA12.yml
@@ -1,4 +1,3 @@
-name: xmipp3
 channels:
   - nvidia
   - conda-forge
diff --git a/conda/xmipp_CUDA13.yml b/conda/xmipp_CUDA13.yml
index d2bf4b15f..48ed5b293 100644
--- a/conda/xmipp_CUDA13.yml
+++ b/conda/xmipp_CUDA13.yml
@@ -1,4 +1,3 @@
-name: xmipp3
 channels:
   - nvidia
   - conda-forge

From d3edb9ac9f9ab5338d87dcb27e5989045eba6d8a Mon Sep 17 00:00:00 2001
From: albertmena <12760268+albertmena@users.noreply.github.com>
Date: Tue, 13 Oct 2026 11:42:52 +0200
Subject: [PATCH 5/6] remove nvidia for only CPU

---
 conda/xmipp_CPU.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/conda/xmipp_CPU.yml b/conda/xmipp_CPU.yml
index 2d1e22e94..db68fd9b3 100644
--- a/conda/xmipp_CPU.yml
+++ b/conda/xmipp_CPU.yml
@@ -1,5 +1,4 @@
 channels:
-  - nvidia
   - conda-forge
   - nodefaults
 dependencies:

From 43621988d5cfffbd5e2d44a3e390b6c83d93d484 Mon Sep 17 00:00:00 2001
From: albertmena <12760268+albertmena@users.noreply.github.com>
Date: Tue, 13 Oct 2026 11:48:55 +0200
Subject: [PATCH 6/6] min driver versions

---
 conda/environments.json | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/conda/environments.json b/conda/environments.json
index 196ad0aa0..453df4cb8 100644
--- a/conda/environments.json
+++ b/conda/environments.json
@@ -1,8 +1,8 @@
 {
   "environments": [
-    {"id": "CUDA13", "file": "conda/xmipp_CUDA13.yml", "min_driver_version": "580.65.06"},
-    {"id": "CUDA12", "file": "conda/xmipp_CUDA12.yml", "min_driver_version": "525.60.13"},
-    {"id": "CUDA11", "file": "conda/xmipp_CUDA11.yml", "min_driver_version": "450.80.02"},
+    {"id": "CUDA13", "file": "conda/xmipp_CUDA13.yml", "min_driver_version": "590.48.01"},
+    {"id": "CUDA12", "file": "conda/xmipp_CUDA12.yml", "min_driver_version": "570.124.06"},
+    {"id": "CUDA11", "file": "conda/xmipp_CUDA11.yml", "min_driver_version": "520.61.05"},
     {"id": "CPU",    "file": "conda/xmipp_CPU.yml"}
   ]
 }