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cff-version: 1.2.0
message: "If you use this software, please cite it using the metadata from this file."
type: software
title: "TemGymCore"
abstract: >-
A differentiable ray tracing package for transmission electron microscopy
built on JAX. Optical systems are described through the Jacobian (ABCD ray
transfer matrices) or Taylor-expansion coefficients of the ray coordinates
through the system, enabling, for example, the verification of coordinate
systems and descan error in 4D STEM shadow-image experiments.
authors:
- family-names: Landers
given-names: David
email: davidlandersresearch@gmail.com
orcid: "https://orcid.org/0000-0002-3295-9473"
affiliation: "Univ. Grenoble Alpes, CEA, IRIG, MEM, LEMMA, 17 avenue des Martyrs, Grenoble, 38000, France"
- family-names: Bryan
given-names: Matthew
email: matthewbryan52@gmail.com
orcid: "https://orcid.org/0000-0001-9134-384X"
affiliation: "CEA LETI, France"
- family-names: Weber
given-names: Dieter
email: d.weber@fz-juelich.de
orcid: "https://orcid.org/0000-0001-6635-9567"
affiliation: "Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons, Forschungszentrum Jülich, 52425 Jülich, Germany"
repository-code: "https://github.com/TemGym/TemGymCore"
url: "https://github.com/TemGym/TemGymCore"
license: GPL-3.0-only # must match the SPDX license in pyproject.toml
keywords:
- electron microscopy
- virtual twin
- ray tracing
- differentiable programming
- JAX
- 4D STEM
references:
- type: article
authors:
- family-names: Landers
given-names: David
- family-names: Clancy
given-names: Ian
- family-names: Weber
given-names: Dieter
- family-names: Dunin-Borkowski
given-names: Rafal E.
- family-names: Stewart
given-names: Andrew
title: "TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation"
journal: "Journal of Applied Crystallography"
volume: 56
issue: 4
year: 2023
doi: "10.1107/S1600576723005174"