Issues

• See the dependabot alert with biopython vulnerability - to xml via entrez -> before resuming dev

  NorwegianVeterinaryInstitute/DPI#40 · Filter by author evezeyl opened on Apr 23, 2026

• merging to single database

  NorwegianVeterinaryInstitute/DPI#39 · Filter by author evezeyl opened on May 30, 2025
  

• _MAIN: Biostats analyses plan - from database structure to analysis of data

  Feature

  NorwegianVeterinaryInstitute/DPI#38 · Filter by author evezeyl opened on May 9, 2025
  

• FEATURE

  enhancement
  NorwegianVeterinaryInstitute/DPI#37 · Filter by author evezeyl opened on May 7, 2025

• Homogeneize requirements python (docker / conda) & update

  enhancementlater
  Task

  NorwegianVeterinaryInstitute/DPI#35 · Filter by author evezeyl opened on Apr 12, 2025
  

• Tweak to bypass external bug - document - think of eventual impact

  documentation
  Task

  NorwegianVeterinaryInstitute/DPI#31 · Filter by author evezeyl opened on Sep 18, 2024
  2

  

• _MAIN : TODO overview

  enhancement
  Feature

  NorwegianVeterinaryInstitute/DPI#29 · Filter by author evezeyl opened on Feb 22, 2024
  

• Adding data to the database - template

  enhancement
  Feature

  NorwegianVeterinaryInstitute/DPI#18 · Filter by author evezeyl opened on Oct 3, 2023
  

• Better formating output tables for visualisation

  enhancement
  Task

  NorwegianVeterinaryInstitute/DPI#17 · Filter by author evezeyl opened on Oct 3, 2023
  

• Make final organigram of pipeline in readme

  enhancement
  Task

  NorwegianVeterinaryInstitute/DPI#15 · Filter by author evezeyl opened on Oct 3, 2023
  

• conda env for checkr

  enhancementlater
  Feature

  NorwegianVeterinaryInstitute/DPI#13 · Filter by author evezeyl opened on Oct 2, 2023
  

• documentation - to complete

  documentation
  Task

  NorwegianVeterinaryInstitute/DPI#12 · Filter by author evezeyl opened on Oct 2, 2023
  1

  

• Choose wich files are required as output from pipeline - do not need all for production

  enhancement
  Task

  NorwegianVeterinaryInstitute/DPI#9 · Filter by author evezeyl opened on Sep 18, 2023
  2