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@PennLINC

Lifespan Informatics and Neuroimaging Center

The Lifespan Informatics and Neuroimaging Center at the University of Pennylvannia
README.md

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  1. qsiprep qsiprep Public

    Preprocessing of diffusion MRI

    Python 193 63

  2. qsirecon qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    Python 25 17

  3. aslprep aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    Python 64 22

  4. xcp_d xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    Python 119 39

  5. CuBIDS CuBIDS Public

    Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

    Python 30 13

  6. babs babs Public

    BIDS App Bootstrap (BABS)

    Python 13 8

Repositories

Showing 10 of 240 repositories
  • unpile-testdata Public
    PennLINC/unpile-testdata's past year of commit activity
    0 0 0 0 Updated Oct 11, 2026
  • sypres-docs Public

    Analysis and documentation repo for SYPRES.

    PennLINC/sypres-docs's past year of commit activity
    JavaScript 2 MIT 0 2 6 Updated Oct 11, 2026
  • qsiprep Public

    Preprocessing of diffusion MRI

    PennLINC/qsiprep's past year of commit activity
    Python 193 BSD-3-Clause 63 71 11 Updated Oct 10, 2026
  • aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    PennLINC/aslprep's past year of commit activity
    Python 64 22 68 (3 issues need help) 5 Updated Oct 10, 2026
  • cs_dmri Public

    Rust/Python methods for fast recon of dMRI data

    PennLINC/cs_dmri's past year of commit activity
    Rust 0 Apache-2.0 0 0 0 Updated Oct 9, 2026
  • odx-rs Public
    PennLINC/odx-rs's past year of commit activity
    Rust 1 Apache-2.0 0 0 0 Updated Oct 9, 2026
  • CuBIDS Public

    Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

    PennLINC/CuBIDS's past year of commit activity
    Python 30 MIT 13 45 11 Updated Oct 9, 2026
  • TRXScan Public

    Simulate realistic dMRI with streamlines and psegs

    PennLINC/TRXScan's past year of commit activity
    Python 0 Apache-2.0 0 4 0 Updated Oct 9, 2026
  • aslscan Public

    ASL simulator

    PennLINC/aslscan's past year of commit activity
    Rust 0 0 0 0 Updated Oct 8, 2026
  • mrsim-acq Public
    PennLINC/mrsim-acq's past year of commit activity
    Rust 0 0 0 0 Updated Oct 8, 2026
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