Issues

• Profile-profile alignment does not preserve columns of input profiles

  refresh-bio/FAMSA#62 · Filter by author kevinmoran1988 opened on Jan 6, 2026

• Segmentation fault on profile-profile alignment in refinement

  bug
  refresh-bio/FAMSA#61 · Filter by author althonos opened on Dec 3, 2025
  1

  

• make installation failed

  refresh-bio/FAMSA#60 · Filter by author chongjing opened on Dec 3, 2025

• Error when using NJ tree: incomplete tree and assertion failure in profile.cpp:248

  bug
  refresh-bio/FAMSA#57 · Filter by author pyspider opened on Sep 8, 2025
  2

  

• Stupid question: nucleotide sequences

  enhancement
  refresh-bio/FAMSA#56 · Filter by author MrTomRod opened on Aug 13, 2025
  1

  

• Alignment issue example on macOS-arm64 but not on linux server during refinement

  bug
  refresh-bio/FAMSA#54 · Filter by author raufs opened on Aug 6, 2025
  

• [Request] Align unaligned sequences to a profile

  refresh-bio/FAMSA#51 · Filter by author kevinmoran1988 opened on Feb 14, 2025
  2

• Error at run time

  bug
  refresh-bio/FAMSA#43 · Filter by author ghost opened on Sep 20, 2023
  1

  

• Request Clustal format output

  enhancement
  refresh-bio/FAMSA#42 · Filter by author stubrown opened on Aug 7, 2023
  1

  

• make: *** [makefile:227: src/core/profile_par.o] Error 1 In Ubuntu 22

  bug
  refresh-bio/FAMSA#40 · Filter by author fermza opened on May 19, 2023
  

• Reverse compliments

  question
  refresh-bio/FAMSA#39 · Filter by author jamesPet opened on Mar 14, 2023
  2