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Merge pull request #215 from thomaskf/bugfix
Build
#444:
Commit
63c330d
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roblanf
30m 55s
roblanf
roblanf
30m 55s
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agentbench: author instructions v2 and editor-run one-shot evaluation
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#443:
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6cf6e05
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roblanf
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agentbench: draft author instructions, CPU-budget ledger and one-shot…
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#442:
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de6d377
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8m 1s
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roblanf
8m 1s
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agentbench: drop stray __pycache__ and ignore it
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#441:
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fb40d89
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30m 42s
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roblanf
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agentbench: add two real alignments from BenchmarkAlignments
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#440:
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agentbench: search from saved start trees, complex-model tasks, broad…
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#439:
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roblanf
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Add agentbench: protocol and benchmark harness for agent-driven perfo…
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#438:
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Merge pull request #215 from thomaskf/bugfix
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#437:
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roblanf
30m 52s
roblanf
roblanf
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Fix submodel indexing logic in ModelMarkov functions, fix likelihood calculations in AlignmentPairwise
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#436:
Pull request
#194
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StefanFlaumberg
31m 44s
StefanFlaumberg:fixmodel
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Add extant sequence reconstruction (-esr) and gap-aware ASR/ESR (-gap-asr, -gap-esr)
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#435:
Pull request
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trongnhanuit
30m 57s
trongnhanuit:gap_asr_esr
trongnhanuit:gap_asr_esr
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Fix MixtureFinder error messages
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#434:
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#222
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HS6986
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HS6986:FixMixtureFinderErrorMessages
HS6986:FixMixtureFinderErrorMessages
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Fix a bug about mAIC log file output #218
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#433:
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HuaiyanRen
30m 50s
huaiyan
huaiyan
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remove dead PF+mAIC variables left
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c674c17
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Report mAIC/deltamAIC on the PartitionFinder step line under -merit m…
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81332c7
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Fix integer overflow when computing distance matrices
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#430:
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#217
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Thomas1664
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Thomas1664:fix-int-overflow
Thomas1664:fix-int-overflow
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SH-aLRT: draw RELL replicates as bootstrap samples whatever -j/-J selected (#198)
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#429:
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31m 7s
cindykrafft:fix/issue-198-sh-alrt-jackknife
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Merge pull request #215 from thomaskf/bugfix
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#428:
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master
master
30m 45s
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Merge branch 'fixmixlen'
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#427:
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7m 36s
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Merge pull request #182 from StefanFlaumberg/fixmixlen
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#426:
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e4b0a88
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2m 33s
master
master
2m 33s
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Remove -ft AUTO and match benchmark thresholds by identifier
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#425:
Pull request
#215
opened by
thomaskf
37m 58s
thomaskf:bugfix
thomaskf:bugfix
37m 58s
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remove CI tests re. PR #193
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master
master
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Merge pull request #213 from thomaskf/bugfix
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#423:
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69a89ac
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bqminh
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master
master
11m 1s
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SH-aLRT: draw RELL replicates as bootstrap samples whatever -j/-J selected (#198)
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#422:
Pull request
#214
opened by
cindykrafft
21m 11s
cindykrafft:fix/issue-198-sh-alrt-jackknife
cindykrafft:fix/issue-198-sh-alrt-jackknife
21m 11s
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Fix the CI workflow
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#421:
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thomaskf
37m 17s
thomaskf:bugfix
thomaskf:bugfix
37m 17s
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Fix the CI workflow
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#420:
Pull request
#213
opened by
thomaskf
42m 19s
thomaskf:bugfix
thomaskf:bugfix
42m 19s
View #213
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